{ "_id": "6a140da0acfb0bcc41d3ad3b", "Package": "SQN", "Type": "Package", "Title": "Subset Quantile Normalization", "Version": "1.0.6", "Date": "2022-06-10", "Author": "Zhijin(Jean) Wu, Martin Aryee", "Maintainer": "Martin Aryee ", "Description": "Normalization based a subset of negative control probes as\ndescribed in 'Subset quantile normalization using negative\ncontrol features'. Wu Z, Aryee MJ, J Comput Biol. 2010\nOct;17(10):1385-95 [PMID 20976876].", "License": "LGPL (>= 2.0)", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-25 08:48:36 UTC", "User": "root" }, "Repository": "https://martinaryee.r-universe.dev", "Date/Publication": "2022-06-10 15:00:02 UTC", "RemoteUrl": "https://github.com/cran/SQN", "RemoteRef": "HEAD", "RemoteSha": "58222af0e48204ed68e4181e9ba33cc25c22c853", "MD5sum": "4fc81e283ad16fe5d828e7fac1cc8bff", "_user": "martinaryee", "_type": "src", "_file": "SQN_1.0.6.tar.gz", "_fileid": "05a7c45d33cdec6fe38394b72e1c31c043aa63722d2c52445036a44588febdae", "_filesize": 177814, "_sha256": "05a7c45d33cdec6fe38394b72e1c31c043aa63722d2c52445036a44588febdae", "_created": "2026-05-25T08:48:36.000Z", "_published": "2026-05-25T08:51:44.365Z", "_distro": "noble", "_jobs": [ { "job": 77683761537, "time": 98, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7194925920" }, { "job": 77683761531, "time": 96, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7194925359" }, { "job": 77683761562, "time": 127, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7194926876" }, { "job": 77683761570, "time": 130, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7194926798" }, { "job": 77683416795, "time": 150, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7194899083" }, { "job": 77683761529, "time": 84, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7194922209" }, { "job": 77683761560, "time": 75, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7194919890" }, { "job": 77683761563, "time": 69, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7194919808" }, { "job": 77683761551, "time": 63, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7194916808" } ], "_buildurl": "https://github.com/r-universe/martinaryee/actions/runs/26391905162", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/SQN", "_commit": { "id": "58222af0e48204ed68e4181e9ba33cc25c22c853", "author": "Martin Aryee ", "committer": "cran-robot ", "message": "version 1.0.6\n", "time": 1654873202 }, "_maintainer": { "name": "Martin Aryee", "email": "martin.aryee@gmail.com", "login": "martinaryee", "description": "Aryee Lab @ Dept of Data Science, Dana Farber Cancer Institute / Broad Institute of MIT and Harvard.", "uuid": 1827011 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 2.6.0", "role": "Depends" }, { "package": "mclust", "version": ">= 3.2", "role": "Depends" }, { "package": "nor1mix", "version": ">= 1.0-7", "role": "Depends" } ], "_owner": "cran", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "martinaryee", "count": 2, "uuid": 1827011 } ], "_userbio": { "uuid": 1827011, "type": "user", "name": "Martin Aryee", "description": "Aryee Lab @ Dept of Data Science, Dana Farber Cancer Institute / Broad Institute of MIT and Harvard." }, "_downloads": { "count": 262, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/SQN" }, "_mentions": 7, "_searchresults": 7, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/SQN.html", "manual.pdf" ], "_realowner": "martinaryee", "_cranurl": false, "_releases": [ { "version": "1.0", "date": "2010-01-22" }, { "version": "1.0.4", "date": "2011-08-03" }, { "version": "1.0.5", "date": "2012-08-13" }, { "version": "1.0.6", "date": "2022-06-10" } ], "_exports": [ "mix.qn", "SQN", "SQN.demo.data" ], "_datasets": [ { "name": "sqnData0", "title": "example data", "object": "sqnData0", "file": "sqnData0.rda", "class": [ "matrix", "array" ], "fields": [ "ya", "yb" ], "rows": 6000, "table": true, "tojson": true } ], "_help": [ { "page": "SQN", "title": "subset quantile normalization", "topics": [ "mix.qn", "SQN", "SQN.demo.data" ] }, { "page": "sqnData0", "title": "example data", "topics": [ "sqnData0" ] } ], "_rundeps": [ "mclust", "nor1mix" ], "_score": 1.845098040014257, "_indexed": true, "_nocasepkg": "sqn", "_universes": [ "martinaryee" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.6", "date": "2026-05-25T08:50:20.000Z", "distro": "noble", "commit": "58222af0e48204ed68e4181e9ba33cc25c22c853", "fileid": "371b4470b6a0b0f56d6c6531e6134973f18acff7ad0e05e9e5d96805ed6a7c3a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/martinaryee/actions/runs/26391905162" }, { "r": "4.6.0", "os": "linux", "version": "1.0.6", "date": "2026-05-25T08:50:17.000Z", "distro": "noble", "commit": "58222af0e48204ed68e4181e9ba33cc25c22c853", "fileid": "c78975f66dc0d6ce28e321ff94f4814d0e31ef02b6e061c375cc8c9861ee429a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/martinaryee/actions/runs/26391905162" }, { "r": "4.5.3", "os": "mac", "version": "1.0.6", "date": "2026-05-25T08:50:27.000Z", "commit": "58222af0e48204ed68e4181e9ba33cc25c22c853", "fileid": "0d1770a00e82a4c681fc6853df6b53f5d8e552706a8f04821e83794336960513", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/martinaryee/actions/runs/26391905162" }, { "r": "4.6.0", "os": "mac", "version": "1.0.6", "date": "2026-05-25T08:50:25.000Z", "commit": "58222af0e48204ed68e4181e9ba33cc25c22c853", "fileid": "24da934e2beb52f85cab91e57a6e695316def19c840caeda6a41a312070fadda", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/martinaryee/actions/runs/26391905162" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.6", "date": "2026-05-25T08:50:16.000Z", "commit": "58222af0e48204ed68e4181e9ba33cc25c22c853", "fileid": "4519dd76c4917b8d2ab1ad18f0d35229d98622e3a27f6fc8fa61687c4cff1924", "status": "success", "buildurl": "https://github.com/r-universe/martinaryee/actions/runs/26391905162" }, { "r": "4.7.0", "os": "win", "version": "1.0.6", "date": "2026-05-25T08:49:53.000Z", "commit": "58222af0e48204ed68e4181e9ba33cc25c22c853", "fileid": "5b06ef1273878edd7f560edaf4643429208e5c5ad923d2c6ef81b845ad511194", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/martinaryee/actions/runs/26391905162" }, { "r": "4.5.3", "os": "win", "version": "1.0.6", "date": "2026-05-25T08:49:53.000Z", "commit": "58222af0e48204ed68e4181e9ba33cc25c22c853", "fileid": "f2ef1344c068a984a1770a54fdc63359bf546dc8cb6ac799d56933a70f8c24c8", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/martinaryee/actions/runs/26391905162" }, { "r": "4.6.0", "os": "win", "version": "1.0.6", "date": "2026-05-25T08:49:42.000Z", "commit": "58222af0e48204ed68e4181e9ba33cc25c22c853", "fileid": "02672fd11788dbfe3b029ec33c172061a8d2973fa90e690695ae3a102e62dad9", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/martinaryee/actions/runs/26391905162" } ] }